STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2670Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: tcx:Tcr_1872 ArsR family transcriptional regulator. (120 aa)    
Predicted Functional Partners:
Tter_2671
PFAM: ABC-2 type transporter; KEGG: sdy:SDY_0811 hypothetical protein.
       0.542
Tter_1137
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH4037 cadmium-binding protein (cadmium efflux system accessory protein).
  
     0.521
Tter_2672
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_3803 ABC transporter-related protein.
       0.510
Tter_2667
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: aba:Acid345_2957 protein tyrosine phosphatase.
  
  
 0.469
Tter_2668
PFAM: phosphate transporter; KEGG: gme:Gmet_3131 phosphate transporter.
     
 0.414
Tter_2669
Hypothetical protein.
       0.412
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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