STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2681PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_3856 glyoxalase/bleomycin resistance protein/dioxygenase. (121 aa)    
Predicted Functional Partners:
Tter_2682
KEGG: aba:Acid345_0701 hypothetical protein.
       0.598
Tter_0990
Hypothetical protein.
  
     0.554
Tter_1121
PFAM: transcriptional regulator PadR family protein; KEGG: bch:Bcen2424_0122 PadR-like family transcriptional regulator.
  
    0.539
Tter_2859
PFAM: transcriptional activator domain; TPR repeat- containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
  
    0.526
Tter_0971
KEGG: lpf:lpl2298 hypothetical protein.
  
     0.488
Tter_2021
PFAM: Helix-turn-helix type 11 domain protein; KEGG: pol:Bpro_0147 helix-turn-helix, type 11.
 
   
 0.450
Tter_2166
PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: aba:Acid345_4546 transcriptional regulator, DeoR family.
 
   
 0.449
Tter_2786
PFAM: regulatory protein TetR; KEGG: cak:Caul_4437 TetR family transcriptional regulator.
 
    0.429
Tter_2012
PFAM: ferric iron reductase; KEGG: pmy:Pmen_2861 ferric iron reductase.
  
     0.424
Tter_2683
PFAM: Abortive infection protein; KEGG: pap:PSPA7_5866 hypothetical protein.
       0.421
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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