STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2689PFAM: BioY protein; KEGG: mxa:MXAN_2207 BioY family protein. (197 aa)    
Predicted Functional Partners:
Tter_2111
PFAM: cobalt transport protein; KEGG: vfm:VFMJ11_1660 ABC-type cobalt transport system, permease component.
 
 0.964
Tter_0370
PFAM: cobalt transport protein; KEGG: bha:BH0166 hypothetical protein.
 
 0.960
Tter_0884
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1281 cobalt ABC transporter, ATP- binding protein.
   
 
 0.929
Tter_0883
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: gbm:Gbem_3806 cobalt ABC transporter, inner membrane subunit CbiQ.
  
 
 0.763
Tter_0002
TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; KEGG: gme:Gmet_1987 biotin--acetyl-CoA-carboxylase ligase.
 
   
 0.552
Tter_2690
KEGG: sugar ABC transporter.
       0.508
Tter_2691
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: mlo:mlr2441 permease protein of sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.502
Tter_2692
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_1833 ABC transporter related.
       0.502
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.