STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2690KEGG: sugar ABC transporter. (341 aa)    
Predicted Functional Partners:
Tter_2691
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: mlo:mlr2441 permease protein of sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Tter_2692
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_1833 ABC transporter related.
 
 
 0.998
Tter_2194
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
   
 
 0.995
Tter_1525
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ccs:CCNA_01359 myo-inositol catabolism protein IolB.
 
  
 0.799
Tter_1524
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sus:Acid_1483 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
 
  
 0.789
Tter_0557
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bra:BRADO3246 sensor histidine kinase.
   
 
 0.763
Tter_2638
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pmr:PMI2884 nitrogen regulation protein NR(I) (two-component system response regulator).
   
 
 0.763
Tter_0290
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_0643 sensory box histidine kinase.
    
 
 0.755
Tter_2176
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bsu:BSU34710 hypothetical protein.
    
 
 0.755
Tter_1521
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: lpf:lpl1615 hypothetical protein.
 
    0.722
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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