STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2700PFAM: oxidoreductase domain protein; KEGG: hypothetical protein. (362 aa)    
Predicted Functional Partners:
Tter_1916
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH1248 NADH-dependent dyhydrogenase.
  
     0.753
Tter_1523
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcz:pE33L466_0299 myo-inositol 2- dehydrogenase.
  
     0.737
Tter_2602
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bid:Bind_0626 oxidoreductase domain- containing protein.
  
     0.722
Tter_2606
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mll1511 hypothetical protein.
  
     0.702
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
  
     0.689
Tter_2701
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bba:Bd1226 maltose/maltodextrin ABC transporter permease.
       0.686
Tter_2702
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1761 hypothetical protein.
       0.686
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
    0.659
Tter_2699
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rpi:Rpic_0879 transcriptional regulator, LacI family.
       0.645
Tter_2265
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0002098 putative dehydrogenase protein.
  
     0.609
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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