STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2710KEGG: gsu:GSU0719 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Tter_2711
PFAM: Uracil-DNA glycosylase superfamily; KEGG: mca:MCA3092 uracil-DNA glycosylase.
       0.773
Tter_1773
KEGG: bha:BH1004 hypothetical protein.
  
     0.663
Tter_2709
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_5903 response regulator receiver protein.
       0.598
Tter_2712
Hypothetical protein.
       0.557
Tter_1164
PFAM: protein of unknown function DUF201; phosphoribosylglycinamide synthetase; KEGG: ade:Adeh_2440 biotin carboxylase-like.
  
     0.502
Tter_2673
PFAM: ABC transporter related; LytTr DNA-binding region; SMART: AAA ATPase; KEGG: bce:BC5286 transcriptional regulator.
  
     0.497
Tter_1194
KEGG: sfu:Sfum_1006 hypothetical protein.
  
     0.479
Tter_2671
PFAM: ABC-2 type transporter; KEGG: sdy:SDY_0811 hypothetical protein.
  
     0.445
Tter_2708
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein.
       0.415
Tter_2027
KEGG: ank:AnaeK_0999 hypothetical protein.
  
     0.401
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.