Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tter_2715KEGG: sus:Acid_0589 hypothetical protein. (279 aa)    
Predicted Functional Partners:
Tter_0462
Hypothetical protein; KEGG: pca:Pcar_2141 ABC-type transport system, putative ATPase subunit.
  
     0.683
Tter_1301
Hypothetical protein.
  
     0.658
Tter_2408
Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: ppw:PputW619_2280 AAA ATPase.
  
     0.639
Tter_1049
PFAM: integrase domain protein SAM domain protein; KEGG: noc:Noc_0687 phage integrase; Belongs to the 'phage' integrase family.
  
     0.628
Tter_0460
Hypothetical protein.
  
     0.594
Tter_2714
PFAM: major facilitator superfamily MFS_1; KEGG: ank:AnaeK_3300 major facilitator superfamily MFS_1.
 
     0.581
Tter_2716
KEGG: hypothetical protein.
       0.526
Tter_2717
KEGG: hypothetical protein.
       0.515
Tter_1764
KEGG: noc:Noc_1089 hypothetical protein.
  
     0.514
Tter_0085
KEGG: dUTPase; K01567.
  
     0.505
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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