STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2717KEGG: hypothetical protein. (218 aa)    
Predicted Functional Partners:
Tter_2716
KEGG: hypothetical protein.
 
    
0.819
Tter_0762
PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: mrd:Mrad2831_5333 helix-hairpin-helix DNA- binding motif-containing protein.
 
     0.588
Tter_1599
PFAM: Arylsulfotransferase; KEGG: msl:Msil_1927 hypothetical protein.
  
     0.584
Tter_2715
KEGG: sus:Acid_0589 hypothetical protein.
       0.515
Tter_2026
TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE; KEGG: mes:Meso_2424 UV-endonuclease UvdE.
  
     0.505
Tter_2392
PFAM: glycoside hydrolase family 43; KEGG: sal:Sala_0739 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.497
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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