STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2727Dehydrogenase, selenocysteine-containing protein; Contains selenocysteine. (228 aa)    
Predicted Functional Partners:
Tter_1226
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: acp:A2cp1_4094 thioredoxin reductase.
 
  
 0.863
Tter_2726
Hypothetical protein.
       0.762
Tter_2725
KEGG: tbd:Tbd_2741 hypothetical protein.
       0.717
Tter_2728
KEGG: afw:Anae109_3510 hypothetical protein.
       0.608
Tter_2724
PFAM: protein of unknown function DUF302; KEGG: gme:Gmet_3125 hypothetical protein.
       0.549
Tter_2722
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: azo:azo2809 ArsR family transcriptional regulator.
     
 0.529
Tter_2723
PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bcb:BCB4264_A3523 hydroxyacylglutathione hydrolase.
       0.529
Tter_2720
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bmj:BMULJ_05212 hydroxyacylglutathione hydrolase.
       0.492
Tter_2721
PFAM: protein of unknown function DUF81; KEGG: mxa:MXAN_0177 membrane protein.
       0.492
Tter_2729
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bha:BH3700 glycerophosphoryl diester phosphodiesterase.
       0.482
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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