STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2728KEGG: afw:Anae109_3510 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Tter_1121
PFAM: transcriptional regulator PadR family protein; KEGG: bch:Bcen2424_0122 PadR-like family transcriptional regulator.
  
     0.612
Tter_2727
Dehydrogenase, selenocysteine-containing protein; Contains selenocysteine.
       0.608
Tter_2729
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bha:BH3700 glycerophosphoryl diester phosphodiesterase.
       0.603
Tter_2730
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: sus:Acid_5289 2-keto-3-deoxy-phosphogluconate aldolase.
       0.603
Tter_2726
Hypothetical protein.
       0.599
Tter_2725
KEGG: tbd:Tbd_2741 hypothetical protein.
       0.566
Tter_1731
PFAM: protein of unknown function DUF1470; KEGG: bcj:BCAL1138 hypothetical protein.
  
     0.542
Tter_2859
PFAM: transcriptional activator domain; TPR repeat- containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
  
     0.492
Tter_1450
Hypothetical protein.
  
     0.466
Tter_2724
PFAM: protein of unknown function DUF302; KEGG: gme:Gmet_3125 hypothetical protein.
       0.442
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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