STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2795PFAM: glycosyl transferase group 1; KEGG: sse:Ssed_2964 hypothetical protein. (325 aa)    
Predicted Functional Partners:
Tter_2794
PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_0969 glycosyl transferase, group 1.
     0.865
Tter_2793
KEGG: ppd:Ppro_0062 hypothetical protein.
 
     0.812
Tter_2798
PFAM: glycosyl transferase group 1; KEGG: bmj:BMULJ_02257 putative glycosyltransferase.
 
     0.812
Tter_2797
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: gur:Gura_1677 NAD-dependent epimerase/dehydratase.
  
    0.796
Tter_2796
Thymidylate kinase-like protein; KEGG: aba:Acid345_4615 thymidylate kinase.
       0.773
Tter_1847
PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_3084 glycosyl transferase group 1.
  
     0.601
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.565
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.564
Tter_2799
PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0844 cell wall biosynthesis glycosyltransferase-like protein.
  
    0.537
Tter_2807
PFAM: glycosyl transferase group 1; KEGG: gme:Gmet_2004 glycosyl transferase, group 1.
  
     0.518
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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