STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2800PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_2352 glycosyl transferase family protein. (309 aa)    
Predicted Functional Partners:
Tter_1179
PFAM: O-antigen polymerase; KEGG: aba:Acid345_2587 O-antigen polymerase.
 
   
 0.790
Tter_1176
PFAM: O-antigen polymerase; KEGG: aba:Acid345_2587 O-antigen polymerase.
 
   
 0.789
Tter_2799
PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0844 cell wall biosynthesis glycosyltransferase-like protein.
  
  
 0.785
Tter_0083
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_3; Sel1 domain protein repeat- containing protein; SMART: Tetratricopeptide domain protein; Sel1 domain protein repeat-containing protein; KEGG: SLEI family protein.
  
 
 0.697
Tter_2801
PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_2352 glycosyl transferase family protein.
 
   
0.612
Tter_2794
PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_0969 glycosyl transferase, group 1.
 
   
 0.603
Tter_2825
PFAM: Methyltransferase type 12; Methyltransferase type 11; Tetratricopeptide TPR_4; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: lch:Lcho_4081 methyltransferase type 12.
  
 
 0.585
Tter_0962
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: SLEI family protein.
  
 
 0.572
Tter_2112
Signal transduction histidine kinase, LytS; KEGG: ecw:EcE24377A_3259 hypothetical protein.
  
 
 0.572
Tter_1978
PFAM: Creatininase; KEGG: aba:Acid345_1632 creatininase.
  
  
 0.545
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.