STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2802PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4641 ABC transporter related. (439 aa)    
Predicted Functional Partners:
Tter_2803
PFAM: ABC-2 type transporter; KEGG: sus:Acid_4640 ABC-2 type transporter.
 
 0.999
Tter_2608
PFAM: ABC-2 type transporter; KEGG: bba:Bd1727 ABC transporter, permease protein, putative.
  
 
 0.959
Tter_1047
KEGG: sat:SYN_01338 amidophosphoribosyltransferase family protein.
   
    0.650
Tter_1842
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase.
     
 0.507
Tter_2036
PFAM: CsbD family protein; KEGG: hypothetical protein.
  
    0.504
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.492
Tter_2804
Acetyltransferase (isoleucine patch superfamily)- like protein; KEGG: eba:ebA5878 hypothetical protein.
     
 0.474
Tter_0872
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dol:Dole_1674 tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
   
    0.418
Tter_0923
PFAM: integrase family protein; KEGG: bce:BC2556 DNA integration/recombination/invertion protein; Belongs to the 'phage' integrase family.
   
    0.418
Tter_1049
PFAM: integrase domain protein SAM domain protein; KEGG: noc:Noc_0687 phage integrase; Belongs to the 'phage' integrase family.
   
    0.418
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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