STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2807PFAM: glycosyl transferase group 1; KEGG: gme:Gmet_2004 glycosyl transferase, group 1. (393 aa)    
Predicted Functional Partners:
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.874
Tter_2810
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gbm:Gbem_1067 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.800
Tter_2809
PFAM: lipopolysaccharide biosynthesis protein; KEGG: hypothetical protein; K09313 homeobox protein cut-like.
  
  
 0.786
Tter_2806
PFAM: protein of unknown function DUF81; KEGG: bcb:BCB4264_A3067 hypothetical protein.
       0.773
Tter_2808
PFAM: O-antigen polymerase; KEGG: mxa:MXAN_3026 O-antigen polymerase family protein.
       0.773
Tter_2814
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mag:amb0126 dehydrogenase and related protein.
  
    0.727
Tter_2811
PFAM: Transketolase central region; Transketolase domain protein; KEGG: mlo:mll3628 acetoin dehydrogenase (TPP- dependent) beta chain.
       0.723
Tter_2812
Pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component; KEGG: bha:BH0776 acetoin dehydrogenase (TPP- dependent) alpha chain.
       0.723
Tter_2815
PFAM: sugar transferase; KEGG: lch:Lcho_1395 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.702
Tter_0541
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1.
 
 
    0.608
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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