STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2843PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: rde:RD1_3115 MarC family integral membrane protein, putative. (212 aa)    
Predicted Functional Partners:
Tter_2842
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mxa:MXAN_3480 iron-sulfur cluster-binding protein, Rieske family.
     
 0.538
Tter_2840
Hypothetical protein.
       0.525
Tter_2841
Hypothetical protein.
       0.525
Tter_2844
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid ac-diamide synthase.
  
    0.508
Tter_2845
Hypothetical protein; KEGG: mch:Mchl_4857 helicase domain protein.
       0.501
Tter_1066
PFAM: MscS Mechanosensitive ion channel; KEGG: pha:PSHAa0714 mechanosensitive channel protein.
  
    0.482
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
     
 0.401
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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