STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2861PFAM: bifunctional deaminase-reductase domain protein; KEGG: smd:Smed_5058 bifunctional deaminase- reductase domain protein. (199 aa)    
Predicted Functional Partners:
Tter_2860
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMa2267 hypothetical protein.
 
  
 0.851
Tter_2769
PFAM: bifunctional deaminase-reductase domain protein; KEGG: bcb:BCB4264_A3191 riboflavin biosynthesis protein RibD C-domain protein.
  
     0.741
Tter_0579
KEGG: aba:Acid345_0083 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: protein of unknown function DUF198; 78- dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK.
     
 0.478
Tter_2405
KEGG: ade:Adeh_0026 hypothetical protein.
 
     0.458
Tter_2714
PFAM: major facilitator superfamily MFS_1; KEGG: ank:AnaeK_3300 major facilitator superfamily MFS_1.
  
   
 0.450
Tter_1564
TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: acp:A2cp1_0344 M6 family metalloprotease domain protein.
  
     0.448
Tter_2165
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding.
  
    0.445
Tter_2620
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.443
Tter_1187
PFAM: homocysteine S-methyltransferase; methylenetetrahydrofolate reductase; KEGG: scl:sce8634 bifunctional homocysteine S- methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
     
 0.420
Tter_1679
KEGG: met:M446_4899 hypothetical protein.
  
     0.410
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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