STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_0009Hypothetical protein. (89 aa)    
Predicted Functional Partners:
Afer_0010
Hypothetical protein.
       0.773
Afer_0011
Hypothetical protein; KEGG: GK18624.
       0.773
Afer_0012
Hypothetical protein.
       0.773
Afer_0013
Hypothetical protein; KEGG: saq:Sare_5011 Na+/solute symporter.
       0.773
Afer_0014
Hypothetical protein.
       0.773
Afer_0015
Hypothetical protein; KEGG: cak:Caul_4339 peptidase M28.
       0.773
Afer_0016
Hypothetical protein; KEGG: GK12395.
       0.598
Afer_0017
KEGG: dvu:DVU2710 hypothetical protein.
       0.598
Afer_0018
Hypothetical protein.
       0.598
Afer_0019
KEGG: ret:RHE_CH02708 hypothetical protein.
       0.583
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.