Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Afer_0113 | Afer_0114 | Afer_0113 | Afer_0114 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.966 |
| Afer_0113 | Afer_0115 | Afer_0113 | Afer_0115 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | KEGG: ace:Acel_0836 flagellar protein FliS. | 0.987 |
| Afer_0113 | Afer_0135 | Afer_0113 | Afer_0135 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | PFAM: protein of unknown function DUF1078 domain protein; KEGG: kra:Krad_1648 hypothetical protein; Belongs to the flagella basal body rod proteins family. | 0.948 |
| Afer_0113 | Afer_0150 | Afer_0113 | Afer_0150 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ace:Acel_0854 flagellar motor switch protein FliM. | 0.932 |
| Afer_0113 | Afer_0209 | Afer_0113 | Afer_0209 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | KEGG: ace:Acel_0831 flagellar hook-associated protein 3. | 0.778 |
| Afer_0113 | flgK | Afer_0113 | Afer_0208 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ace:Acel_0832 flagellar hook-associated protein FlgK. | 0.950 |
| Afer_0113 | fliW | Afer_0113 | Afer_0210 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.906 |
| Afer_0114 | Afer_0113 | Afer_0114 | Afer_0113 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.966 |
| Afer_0114 | Afer_0115 | Afer_0114 | Afer_0115 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: ace:Acel_0836 flagellar protein FliS. | 0.994 |
| Afer_0114 | Afer_0135 | Afer_0114 | Afer_0135 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | PFAM: protein of unknown function DUF1078 domain protein; KEGG: kra:Krad_1648 hypothetical protein; Belongs to the flagella basal body rod proteins family. | 0.940 |
| Afer_0114 | Afer_0150 | Afer_0114 | Afer_0150 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ace:Acel_0854 flagellar motor switch protein FliM. | 0.937 |
| Afer_0114 | Afer_0209 | Afer_0114 | Afer_0209 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: ace:Acel_0831 flagellar hook-associated protein 3. | 0.927 |
| Afer_0114 | csrA | Afer_0114 | Afer_0211 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.413 |
| Afer_0114 | csrA-2 | Afer_0114 | Afer_1478 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.413 |
| Afer_0114 | flgK | Afer_0114 | Afer_0208 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ace:Acel_0832 flagellar hook-associated protein FlgK. | 0.982 |
| Afer_0114 | fliW | Afer_0114 | Afer_0210 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.705 |
| Afer_0115 | Afer_0113 | Afer_0115 | Afer_0113 | KEGG: ace:Acel_0836 flagellar protein FliS. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.987 |
| Afer_0115 | Afer_0114 | Afer_0115 | Afer_0114 | KEGG: ace:Acel_0836 flagellar protein FliS. | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.994 |
| Afer_0115 | Afer_0135 | Afer_0115 | Afer_0135 | KEGG: ace:Acel_0836 flagellar protein FliS. | PFAM: protein of unknown function DUF1078 domain protein; KEGG: kra:Krad_1648 hypothetical protein; Belongs to the flagella basal body rod proteins family. | 0.945 |
| Afer_0115 | Afer_0150 | Afer_0115 | Afer_0150 | KEGG: ace:Acel_0836 flagellar protein FliS. | PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ace:Acel_0854 flagellar motor switch protein FliM. | 0.927 |
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