STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_0237PFAM: Anion-transporting ATPase; KEGG: rha:RHA1_ro04317 arsenate (2+)-transporting ATPase. (353 aa)    
Predicted Functional Partners:
Afer_0238
PFAM: Anion-transporting ATPase; KEGG: ank:AnaeK_0988 chromosome partitioning-like ATPase.
 
 
   0.990
Afer_0349
KEGG: ade:Adeh_0929 chromosome partitioning-like ATPase.
 
 
  
0.859
Afer_0236
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bur:Bcep18194_B3050 two component transcriptional regulator.
       0.762
Afer_0938
PFAM: cyclase/dehydrase; KEGG: fal:FRAAL0171 hypothetical protein.
 
     0.705
Afer_0235
PFAM: NUDIX hydrolase; KEGG: maq:Maqu_3801 beta-lactamase domain- containing protein.
 
     0.667
Afer_0234
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.492
Afer_1737
PFAM: ABC-1 domain protein; KEGG: fal:FRAAL6034 ABC transporter, ATP-binding protein.
  
     0.460
Afer_1430
KEGG: nca:Noca_2000 hypothetical protein.
  
     0.408
Afer_1917
TIGRFAM: anti-sigma factor; KEGG: saq:Sare_4094 anti-sigma factor RshA.
  
     0.408
Afer_1997
PFAM: ribonuclease BN; KEGG: ace:Acel_1654 ribonuclease BN.
  
     0.405
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.