STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_0577KEGG: oih:OB1441 hypothetical protein. (294 aa)    
Predicted Functional Partners:
Afer_1882
KEGG: ace:Acel_0470 hypothetical protein.
  
     0.689
Afer_0578
TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: fra:Francci3_3865 GTP-binding protein TypA.
       0.685
Afer_1986
PFAM: Ig family protein; KEGG: sus:Acid_0470 Ig family protein.
  
     0.672
Afer_0114
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.662
Afer_0576
PFAM: TrwC relaxase; KEGG: fal:FRAAL6333 putative conjugal transfer protein TraA.
 
     0.636
Afer_1195
KEGG: scl:sce0507 hypothetical protein.
  
     0.628
Afer_1843
PFAM: Chlorite dismutase; KEGG: ttj:TTHA1714 putative heme peroxidase.
  
     0.626
Afer_1023
KEGG: afw:Anae109_1828 hypothetical protein.
  
     0.615
Afer_0797
PFAM: acyl-ACP thioesterase; KEGG: nfa:nfa20140 hypothetical protein.
  
     0.610
Afer_0855
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: afe:Lferr_1745 hypothetical protein.
  
     0.601
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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