STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_0776PFAM: protein of unknown function DUF664; KEGG: sco:SCO1340 hypothetical protein. (173 aa)    
Predicted Functional Partners:
Afer_1338
Putative transcriptional regulator; SMART: regulatory protein ArsR; KEGG: stp:Strop_2302 regulatory protein, ArsR.
  
     0.764
Afer_0607
PFAM: GCN5-related N-acetyltransferase; KEGG: art:Arth_1175 GCN5-related N- acetyltransferase.
  
     0.667
Afer_0835
KEGG: saq:Sare_3891 hypothetical protein.
  
     0.579
Afer_0186
PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_3058 hypothetical protein.
  
     0.575
Afer_0775
KEGG: mse:Msed_0347 hypothetical protein.
       0.553
Afer_0118
KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein.
  
     0.546
mshD
Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
    0.520
Afer_1203
PFAM: protein of unknown function DUF885; KEGG: sen:SACE_1720 hypothetical protein.
  
     0.516
Afer_0282
Hypothetical protein; KEGG: rha:RHA1_ro01864 mycothiol-dependent maleylpyruvate isomerase.
  
     0.501
Afer_1197
KEGG: msm:MSMEG_6365 hypothetical protein.
  
     0.501
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.