STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1037Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; regulatory protein ArsR; SMART: regulatory protein MarR; KEGG: rsa:RSal33209_0720 MarR family transcriptional regulator. (174 aa)    
Predicted Functional Partners:
Afer_1036
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: sma:SAV_5831 multidrug-efflux transporter.
       0.773
Afer_0118
KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein.
  
     0.632
Afer_0075
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; regulatory protein Crp; SMART: regulatory protein MarR; KEGG: esi:Exig_2989 MarR family transcriptional regulator.
  
     0.626
Afer_1038
PFAM: PEBP family protein; KEGG: mpo:Mpop_0898 PEBP family protein.
       0.460
Afer_1522
PFAM: Aldose 1-epimerase; KEGG: saq:Sare_0514 aldose 1-epimerase.
  
     0.414
Afer_0614
KEGG: pap:PSPA7_5451 hypothetical protein.
  
     0.409
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.