STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1044PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related. (331 aa)    
Predicted Functional Partners:
Afer_1043
KEGG: cau:Caur_0271 ABC-2 type transporter.
 
  
 0.875
Afer_1205
KEGG: sco:SCO4586 ABC transporter integral membrane protein.
  
 
 0.837
Afer_1076
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA1530 ABC transporter ATP-binding protein.
   
0.774
Afer_0300
PFAM: ABC-2 type transporter; KEGG: mta:Moth_2298 daunorubicin resistance ABC transporter membrane protein.
  
 0.626
Afer_1878
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 hypothetical protein.
  
 0.571
Afer_0778
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2202 ABC transporter related.
    
0.533
Afer_1045
Hypothetical protein.
       0.503
Afer_0270
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: hau:Haur_0337 ABC transporter related.
 
0.468
Afer_1042
Hypothetical protein.
       0.463
Afer_2029
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: kra:Krad_1516 ABC transporter-related protein.
  
0.445
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.