Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1380KEGG: msm:MSMEG_6524 ABC polyamine/opine/phosphonate transporter, periplasmic ligand binding protein. (382 aa)    
Predicted Functional Partners:
Afer_1381
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_0983 binding-protein-dependent transport systems inner membrane component.
 
 
 0.996
Afer_1382
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_0516 binding-protein-dependent transport systems inner membrane component.
 
  
 0.995
Afer_1383
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_5739 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 
 0.995
Afer_1384
PFAM: metallophosphoesterase; KEGG: nca:Noca_3235 metallophosphoesterase.
       0.781
Afer_1437
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: fal:FRAAL2360 putative transmembrane efflux protein.
  
  
 0.654
Afer_1379
PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3709 major facilitator transporter.
       0.406
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.