STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1733PFAM: alpha/beta hydrolase fold; KEGG: fre:Franean1_2175 alpha/beta hydrolase fold. (251 aa)    
Predicted Functional Partners:
Afer_1195
KEGG: scl:sce0507 hypothetical protein.
  
     0.740
Afer_1023
KEGG: afw:Anae109_1828 hypothetical protein.
  
     0.698
Afer_1451
Cyclic nucleotide-binding protein; KEGG: mse:Msed_0469 hypothetical protein.
  
     0.665
Afer_0380
KEGG: sen:SACE_2172 hypothetical protein.
  
 
   0.655
Afer_1986
PFAM: Ig family protein; KEGG: sus:Acid_0470 Ig family protein.
  
     0.653
Afer_1473
KEGG: sus:Acid_7587 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
     0.649
Afer_1882
KEGG: ace:Acel_0470 hypothetical protein.
  
     0.641
Afer_0577
KEGG: oih:OB1441 hypothetical protein.
  
     0.583
Afer_0114
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.563
Afer_1734
PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: rxy:Rxyl_1713 hypothetical protein.
     
 0.562
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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