STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1743Hypothetical protein; KEGG: azo:azo3908 putative serine/threonine protein kinase. (317 aa)    
Predicted Functional Partners:
Afer_1746
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2677 glycosyl transferase family protein.
       0.788
Afer_1744
PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4614 glycosyl transferase, group 1 family protein.
       0.784
Afer_1745
PFAM: glycosyl transferase group 1; KEGG: met:M446_6932 glycosyl transferase group 1.
       0.778
Afer_1742
TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; Two component regulator propeller; KEGG: ace:Acel_0423 SpoIID/LytB domain-containing protein.
       0.529
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.