STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1790Dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein; KEGG: pmy:Pmen_1970 peptidase S9 prolyl oligopeptidase. (537 aa)    
Predicted Functional Partners:
Afer_1791
methylmalonyl-CoA mutase, large subunit; KEGG: ace:Acel_0674 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
       0.773
Afer_1792
TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: nfa:nfa48000 fructose 1,6-bisphosphatase II.
       0.547
Afer_0607
PFAM: GCN5-related N-acetyltransferase; KEGG: art:Arth_1175 GCN5-related N- acetyltransferase.
  
     0.477
Afer_1205
KEGG: sco:SCO4586 ABC transporter integral membrane protein.
 
     0.433
Afer_1965
PFAM: amidohydrolase 2; KEGG: sen:SACE_3096 amidohydrolase 2.
 
     0.429
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.