STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1934KEGG: bvi:Bcep1808_7294 tungstate/molybdate binding protein. (317 aa)    
Predicted Functional Partners:
Afer_1933
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_7295 tungstate/molybdate transport system permease protein.
 
 0.998
Afer_1931
Transcriptional regulator of molybdate metabolism, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce1136 putative regulator of molybdate uptake.
 
   
 0.946
Afer_1932
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cms:CMS_2522 putative ABC transporter ATP- binding subunit.
     
 0.799
Afer_1035
PFAM: amino acid permease-associated region; KEGG: acr:Acry_0648 amino acid permease-associated region.
  
     0.725
Afer_0781
KEGG: acr:Acry_2205 extracellular ligand-binding receptor.
  
  
 0.692
Afer_1181
PFAM: amino acid permease-associated region; KEGG: afe:Lferr_0867 amino acid permease-associated region.
  
     0.660
Afer_1860
KEGG: dau:Daud_1971 hypothetical protein.
  
     0.653
Afer_1213
PFAM: amino acid permease-associated region; KEGG: tac:Ta0427 L-asparagine permease related protein.
  
     0.640
Afer_0948
PFAM: amino acid permease-associated region; KEGG: tac:Ta0427 L-asparagine permease related protein.
  
     0.632
Afer_0728
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mxa:MXAN_2588 molybdopterin biosynthesis protein MoeB.
  
  
 0.625
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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