Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Afer_1974PFAM: glycosyl transferase family 2; KEGG: met:M446_0315 glycosyl transferase family protein. (853 aa)    
Predicted Functional Partners:
Afer_1748
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_0724 hypothetical protein.
 
  
 0.827
Afer_1747
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1238 ABC transporter ATP-binding protein (partial match).
 
  
 0.762
Afer_0746
PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0460 glycosyl transferase family protein.
  
     0.723
Afer_0540
PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: chu:CHU_3843 dTDP-4-dehydrorhamnose 3,5- epimerase.
 
  
 0.695
Afer_0735
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.680
Afer_0736
KEGG: sen:SACE_6472 putative dTDP-rhamnosyl transferase.
  
     0.623
Afer_1024
PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0441 glycosyl transferase family protein.
 
  
 0.470
Afer_1973
PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_2226 transposase IS3/IS911.
       0.469
Afer_0733
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: fal:FRAAL1228 glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP- glucose pyrophosphorylase) (sugar-nucleotidylation enzyme).
 
  
 0.447
Afer_1976
PFAM: glycosyl transferase group 1; KEGG: pap:PSPA7_6239 glycosyltransferase WbpX.
 
    0.418
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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