STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Afer_1975PFAM: glycosyl transferase group 1; KEGG: jan:Jann_4283 glycosyl transferase, group 1. (763 aa)    
Predicted Functional Partners:
Afer_1976
PFAM: glycosyl transferase group 1; KEGG: pap:PSPA7_6239 glycosyltransferase WbpX.
     0.959
Afer_0743
PFAM: glycosyl transferase group 1; KEGG: ace:Acel_0448 glycosyl transferase, group 1.
  
     0.775
Afer_0744
PFAM: glycosyl transferase group 1; KEGG: fra:Francci3_0735 glycosyl transferase, group 1.
  
     0.775
Afer_0742
PFAM: glycosyl transferase group 1; KEGG: fre:Franean1_5894 glycosyl transferase group 1.
 
     0.774
Afer_1745
PFAM: glycosyl transferase group 1; KEGG: met:M446_6932 glycosyl transferase group 1.
  
     0.770
Afer_1744
PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4614 glycosyl transferase, group 1 family protein.
  
     0.769
Afer_1223
PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_4290 phosphatidylinositol alpha- mannosyltransferase.
  
     0.630
Afer_0107
PFAM: Methyltransferase type 11; glycosyl transferase group 1; Methionine biosynthesis MetW protein; Methyltransferase type 12; KEGG: pcu:pc1183 putative mannosyltransferase.
  
    0.590
Afer_1123
PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; KEGG: tfu:Tfu_1394 mannose-1-phosphate guanylyltransferase.
 
 
 0.457
Afer_1747
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1238 ABC transporter ATP-binding protein (partial match).
 
 
 0.438
Your Current Organism:
Acidimicrobium ferrooxidans
NCBI taxonomy Id: 525909
Other names: A. ferrooxidans DSM 10331, Acidimicrobium ferrooxidans DSM 10331, Acidimicrobium ferrooxidans ICP, Acidimicrobium ferrooxidans str. DSM 10331, Acidimicrobium ferrooxidans strain DSM 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.