Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ85686.1 | SDZ85715.1 | SAMN05660964_00421 | SAMN05660964_00422 | AhpC/TSA family protein. | Uncharacterized conserved protein, DUF924 family. | 0.727 |
SDZ85686.1 | SDZ85743.1 | SAMN05660964_00421 | SAMN05660964_00423 | AhpC/TSA family protein. | Putative protease. | 0.510 |
SDZ85715.1 | SDZ85686.1 | SAMN05660964_00422 | SAMN05660964_00421 | Uncharacterized conserved protein, DUF924 family. | AhpC/TSA family protein. | 0.727 |
SDZ85715.1 | SDZ85743.1 | SAMN05660964_00422 | SAMN05660964_00423 | Uncharacterized conserved protein, DUF924 family. | Putative protease. | 0.539 |
SDZ85743.1 | SDZ85686.1 | SAMN05660964_00423 | SAMN05660964_00421 | Putative protease. | AhpC/TSA family protein. | 0.510 |
SDZ85743.1 | SDZ85715.1 | SAMN05660964_00423 | SAMN05660964_00422 | Putative protease. | Uncharacterized conserved protein, DUF924 family. | 0.539 |
SDZ85743.1 | SEA81084.1 | SAMN05660964_00423 | SAMN05660964_02500 | Putative protease. | Two-component system, OmpR family, sensor histidine kinase BaeS. | 0.480 |
SDZ85743.1 | SEB05605.1 | SAMN05660964_00423 | SAMN05660964_03314 | Putative protease. | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.604 |
SDZ85743.1 | ackA | SAMN05660964_00423 | SAMN05660964_02284 | Putative protease. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.404 |
SDZ85743.1 | rlmN | SAMN05660964_00423 | SAMN05660964_00930 | Putative protease. | 23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.415 |
SEA81084.1 | SDZ85743.1 | SAMN05660964_02500 | SAMN05660964_00423 | Two-component system, OmpR family, sensor histidine kinase BaeS. | Putative protease. | 0.480 |
SEB05605.1 | SDZ85743.1 | SAMN05660964_03314 | SAMN05660964_00423 | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Putative protease. | 0.604 |
ackA | SDZ85743.1 | SAMN05660964_02284 | SAMN05660964_00423 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Putative protease. | 0.404 |
rlmN | SDZ85743.1 | SAMN05660964_00930 | SAMN05660964_00423 | 23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | Putative protease. | 0.415 |