STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ98244.1Methyl-accepting chemotaxis protein. (379 aa)    
Predicted Functional Partners:
SDZ98318.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.999
SEB12165.1
Chemotaxis protein histidine kinase CheA.
 
 0.999
SEB13285.1
Hypothetical protein.
  
 0.999
SDZ98278.1
Hypothetical protein.
 
 0.998
SEA28085.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.996
SDZ98202.1
Chemotaxis signal transduction protein.
  
 0.995
SDZ98136.1
Twitching motility two-component system response regulator PilG.
 
 0.987
SEA81730.1
Signal transduction histidine kinase.
  
 0.984
SDZ98171.1
Twitching motility two-component system response regulator PilH.
 
 0.980
SEB12201.1
Chemotaxis signal transduction protein.
  
 0.976
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.