STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA30084.1Glycosyltransferase involved in cell wall bisynthesis. (355 aa)    
Predicted Functional Partners:
SEA29942.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.850
SEA30020.1
O-antigen ligase.
 
 
  0.840
SEA29906.1
Glycosyltransferase involved in cell wall bisynthesis.
    
0.831
SEA30118.1
Hypothetical protein.
 
     0.808
SEA30053.1
Protein of unknown function.
    
  0.804
SEA29981.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.792
SEB05699.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.767
SEA18733.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.755
SEA73672.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.749
SDZ78516.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.685
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.