STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA52593.1Amino acid adenylation domain-containing protein. (1057 aa)    
Predicted Functional Partners:
SEA29055.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.999
SEA34221.1
Condensation domain-containing protein.
 0.999
SEA34253.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
SEA52560.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
0.999
SEB12839.1
Hypothetical protein.
  
 0.999
SEB12986.1
Long-chain acyl-CoA synthetase.
0.999
SEA28941.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.998
SEA80275.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
0.998
SEB13118.1
Long-chain acyl-CoA synthetase.
  
0.993
SEA52626.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
0.991
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.