STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA76955.1Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. (299 aa)    
Predicted Functional Partners:
SEA76986.1
Hypothetical protein.
       0.581
SEA76810.1
AAA domain (dynein-related subfamily).
     0.577
SEA76898.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
    
0.575
SEA76926.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
    
0.575
SEA76868.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
    
0.548
SEA76841.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
    
0.456
SEB04693.1
Protein kinase domain-containing protein.
 
 
 
  0.426
SEA47377.1
Phosphoethanolamine transferase for glucans (OPG), alkaline phosphatase superfamily.
   
   0.425
SEA76780.1
TIR domain-containing protein.
       0.404
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.404
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.