STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA77262.1Threonine/homoserine efflux transporter RhtA. (299 aa)    
Predicted Functional Partners:
SEA77292.1
Protein of unknown function.
       0.773
SEA77315.1
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
       0.746
SEA77231.1
Glycolate oxidase.
 
     0.589
SEA77179.1
Glycolate oxidase iron-sulfur subunit.
       0.513
SEA77207.1
Glycolate oxidase FAD binding subunit.
       0.513
SEA77340.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
       0.457
SEA98462.1
Hypothetical protein.
  
     0.456
SEA77368.1
Cytochrome c oxidase cbb3-type subunit 2.
       0.431
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.