STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA81347.1Type IV pilus assembly protein PilO. (213 aa)    
Predicted Functional Partners:
SEA81321.1
Type IV pilus assembly protein PilN.
 
 
 0.999
SEA81372.1
Type IV pilus assembly protein PilP.
 
 
 0.998
SEA81296.1
Type IV pilus assembly protein PilM.
 
 
 0.995
SEA81394.1
Type IV pilus assembly protein PilQ.
 
 
 0.994
SEA97333.1
LysM domain-containing protein.
  
 
   0.960
SEA28707.1
Type IV pilus assembly protein PilZ.
  
   
 0.811
SEA63410.1
Type IV pilus assembly protein PilV.
 
   
 0.794
SEA63445.1
Type IV pilin N-term methylation site GFxxxE.
 
  
 0.793
SEA97151.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.772
SEA10951.1
Type IV pilus assembly protein PilF.
  
   
 0.769
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.