STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA89038.1Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit. (402 aa)    
Predicted Functional Partners:
SEA89011.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
 
 0.997
SEA84184.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.977
SEA92351.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.977
SEA74742.1
Anaerobic dimethyl sulfoxide reductase subunit B (DMSO reductase iron-sulfur subunit).
 
 0.976
SEA88988.1
Hypothetical protein.
 
  
 0.949
SEA92375.1
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.945
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.942
tuf-2
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.942
SEA50791.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.942
SEA84164.1
Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.941
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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