Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA94116.1 | SEB07023.1 | SAMN05660964_02895 | SAMN05660964_03379 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peroxiredoxin Q/BCP. | 0.712 |
SEB07023.1 | SEA94116.1 | SAMN05660964_03379 | SAMN05660964_02895 | Peroxiredoxin Q/BCP. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.712 |
SEB07023.1 | SEB07035.1 | SAMN05660964_03379 | SAMN05660964_03380 | Peroxiredoxin Q/BCP. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.808 |
SEB07023.1 | SEB07049.1 | SAMN05660964_03379 | SAMN05660964_03381 | Peroxiredoxin Q/BCP. | Carbohydrate binding domain-containing protein. | 0.476 |
SEB07035.1 | SEB07023.1 | SAMN05660964_03380 | SAMN05660964_03379 | Lysophospholipase, alpha-beta hydrolase superfamily. | Peroxiredoxin Q/BCP. | 0.808 |
SEB07035.1 | SEB07049.1 | SAMN05660964_03380 | SAMN05660964_03381 | Lysophospholipase, alpha-beta hydrolase superfamily. | Carbohydrate binding domain-containing protein. | 0.533 |
SEB07049.1 | SEB07023.1 | SAMN05660964_03381 | SAMN05660964_03379 | Carbohydrate binding domain-containing protein. | Peroxiredoxin Q/BCP. | 0.476 |
SEB07049.1 | SEB07035.1 | SAMN05660964_03381 | SAMN05660964_03380 | Carbohydrate binding domain-containing protein. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.533 |