STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB12631.1NitT/TauT family transport system permease protein. (273 aa)    
Predicted Functional Partners:
SEB12642.1
NitT/TauT family transport system ATP-binding protein.
 
 0.991
SEB12619.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.985
SEB12653.1
Hypothetical protein.
 
   
 0.947
SEB12665.1
Hypothetical protein.
 
     0.941
SEB12675.1
Urea carboxylase.
 
     0.927
SEB12688.1
Allophanate hydrolase.
 
     0.925
SEA99718.1
Nitrate/nitrite transport system ATP-binding protein.
 
 0.902
SEB10047.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.768
SEA99756.1
Nitrate/nitrite transport system substrate-binding protein.
 
 
 0.731
SEA99893.1
Nitrate/nitrite transport system substrate-binding protein.
 
 
 0.731
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.