STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0016PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU1434 peptide ABC transporter, permease protein. (320 aa)    
Predicted Functional Partners:
Apre_0017
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component.
  
 0.974
Apre_0018
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bha:BH0028 oligopeptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.970
Apre_0019
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: rec:RHECIAT_PC0000316 probable oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.969
Apre_0389
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ban:BA4731 oligopeptide ABC transporter, oligopeptide-binding protein.
  
 0.904
Apre_0466
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU12940 dipeptide ABC transporter (permease).
  
 0.900
Apre_0686
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2076 oligopeptide ABC transporter (permease).
 
  
 0.888
Apre_0390
KEGG: bcy:Bcer98_0222 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.875
Apre_0467
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bce:BC0910 oligopeptide transport ATP-binding protein OppD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.873
Apre_0391
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU11370 oligopeptide ABC transporter ATP- binding protein.
  
 0.866
Apre_0387
PFAM: extracellular solute-binding protein family 5; KEGG: ABC transporter substrate binding protein (oligopeptide); K02035 peptide/nickel transport system substrate-binding protein.
 
 0.857
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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