STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0019Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: rec:RHECIAT_PC0000316 probable oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (537 aa)    
Predicted Functional Partners:
Apre_0017
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component.
 
 
 0.977
Apre_0016
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU1434 peptide ABC transporter, permease protein.
 
 
 0.974
Apre_0389
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ban:BA4731 oligopeptide ABC transporter, oligopeptide-binding protein.
 
 0.933
Apre_0466
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU12940 dipeptide ABC transporter (permease).
 
 0.927
Apre_0686
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2076 oligopeptide ABC transporter (permease).
 
 
 0.914
Apre_0465
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU11440 oligopeptide ABC transporter (permease).
 
 
 0.886
Apre_0388
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcs:BCAN_B1031 hypothetical protein.
 
 
 0.883
Apre_0685
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1797 nickel ABC transporter (permease).
 
 
 0.876
Apre_0018
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bha:BH0028 oligopeptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.823
Apre_0020
Hypothetical protein.
       0.781
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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