STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0033KEGG: U-box domain-containing protein. (105 aa)    
Predicted Functional Partners:
Apre_0034
TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: dvm:DvMF_1417 heavy metal translocating P- type ATPase.
 
     0.925
Apre_0640
Conserved hypothetical protein; KEGG: bcz:BCZK0910 ABC transporter permease.
  
     0.665
Apre_0499
PFAM: YodA domain protein; KEGG: baa:BXA0197 zinc-binding lipoprotein AdcA domain protein, (pXO1-130).
  
     0.657
Apre_0739
PFAM: YSIRK Gram-positive signal peptide; KEGG: hypothetical protein.
  
     0.640
Apre_0196
KEGG: rlt:Rleg2_1581 hypothetical protein.
  
     0.600
Apre_0644
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bcz:BCZK0907 sensor histidine kinase.
  
     0.575
Apre_1579
PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein.
  
     0.556
Apre_0011
PFAM: Cupin 2 conserved barrel domain protein; KEGG: abu:Abu_2168 hypothetical protein.
  
     0.532
Apre_0879
KEGG: hypothetical protein.
  
     0.506
Apre_0032
Hypothetical protein; KEGG: xca:xccb100_3123 membrane-anchored nucleotide- binding enzyme.
       0.485
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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