Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
Apre_0055Glycerate kinase; KEGG: ccv:CCV52592_0612 glycerate kinase 1; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family. (367 aa)    
Predicted Functional Partners:
Apre_0503
PFAM: Aldehyde Dehydrogenase; KEGG: bce:BC1285 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.905
Apre_1153
PFAM: Aldehyde Dehydrogenase; KEGG: pca:Pcar_1701 aldehyde dehydrogenase, NAD- linked; Belongs to the aldehyde dehydrogenase family.
   
 
 0.905
Apre_1244
PFAM: Aldehyde Dehydrogenase; KEGG: cco:CCC13826_1326 elongation factor P (EF-P).
   
 
 0.905
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.903
Apre_0056
PFAM: Rhomboid family protein; KEGG: bsu:BSU24870 hypothetical protein.
       0.716
Apre_0057
KEGG: viral A-type inclusion protein.
       0.705
Apre_0058
TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: bsu:BSU11540 hypothetical protein.
       0.700
Apre_0059
PFAM: ABC-1 domain protein; KEGG: bca:BCE_4898 ABC1 family protein.
       0.472
Apre_1284
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: vfi:VF_0650 tRNA-specific adenosine deaminase.
 
 
    0.459
Apre_0677
TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: bha:BH3163 pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.456
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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