STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0113Hypothetical protein; KEGG: mgm:Mmc1_1169 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit. (394 aa)    
Predicted Functional Partners:
Apre_0114
TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; PFAM: alpha/beta hydrolase fold; KEGG: tgr:Tgr7_1512 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
 
  
 0.994
Apre_0115
PFAM: MaoC domain protein dehydratase; KEGG: rru:Rru_A2964 MaoC-like dehydratase.
    
  0.964
Apre_0846
KEGG: bpt:Bpet0987 hypothetical protein.
  
     0.753
Apre_0826
Hypothetical protein; KEGG: nis:NIS_0449 phage-related DNA-binding protein.
  
     0.750
Apre_0852
KEGG: hiq:CGSHiGG_04755 hypothetical protein.
  
     0.737
Apre_1411
PFAM: sugar-binding domain protein; Rib/alpha/Esp surface antigen repeat protein; KEGG: Hypothetical protein CBG09238.
  
     0.729
Apre_1520
Signal transduction histidine kinase-like protein; KEGG: bcz:BCZK2894 sensor histidine kinase.
  
     0.703
Apre_0738
Hypothetical protein.
  
     0.689
Apre_0843
KEGG: plu:plu2894 hypothetical protein.
  
     0.671
Apre_0855
KEGG: ecg:E2348C_2490 hypothetical protein.
  
     0.648
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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