STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0119Putative membrane protein; KEGG: hypothetical protein. (567 aa)    
Predicted Functional Partners:
Apre_0120
PFAM: LemA family protein; KEGG: cha:CHAB381_1739 LemA family protein.
 
     0.847
Apre_0113
Hypothetical protein; KEGG: mgm:Mmc1_1169 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
     0.553
Apre_0121
Potassium uptake protein, TrkH family; KEGG: bha:BH0598 Na+-transporting ATP synthase; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter.
       0.527
Apre_1520
Signal transduction histidine kinase-like protein; KEGG: bcz:BCZK2894 sensor histidine kinase.
  
     0.526
Apre_0122
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: ban:BA4191 TrkA family potassium uptake protein.
       0.524
Apre_0846
KEGG: bpt:Bpet0987 hypothetical protein.
  
     0.494
Apre_1375
PFAM: PhoU family protein; KEGG: bba:Bd1016 phosphate transport system regulatory protein.
   
    0.469
Apre_1183
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: bcb:BCB4264_A3937 signal peptidase I S; Belongs to the peptidase S26 family.
  
    0.419
Apre_0826
Hypothetical protein; KEGG: nis:NIS_0449 phage-related DNA-binding protein.
  
     0.413
Apre_0852
KEGG: hiq:CGSHiGG_04755 hypothetical protein.
  
     0.411
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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