Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_0119Putative membrane protein; KEGG: hypothetical protein. (567 aa)    
Predicted Functional Partners:
Apre_0120
PFAM: LemA family protein; KEGG: cha:CHAB381_1739 LemA family protein.
 
     0.846
Apre_1375
PFAM: PhoU family protein; KEGG: bba:Bd1016 phosphate transport system regulatory protein.
   
    0.617
Apre_0113
Hypothetical protein; KEGG: mgm:Mmc1_1169 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
     0.553
Apre_0121
Potassium uptake protein, TrkH family; KEGG: bha:BH0598 Na+-transporting ATP synthase; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter.
       0.527
Apre_1520
Signal transduction histidine kinase-like protein; KEGG: bcz:BCZK2894 sensor histidine kinase.
  
     0.526
Apre_0122
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: ban:BA4191 TrkA family potassium uptake protein.
       0.524
Apre_0846
KEGG: bpt:Bpet0987 hypothetical protein.
  
     0.494
Apre_1183
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: bcb:BCB4264_A3937 signal peptidase I S; Belongs to the peptidase S26 family.
  
    0.470
gyrA
DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
   
    0.421
Apre_0826
Hypothetical protein; KEGG: nis:NIS_0449 phage-related DNA-binding protein.
  
     0.413
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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