STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0149PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: bha:BH0789 hypothetical protein. (873 aa)    
Predicted Functional Partners:
Apre_0150
PFAM: conserved hypothetical protein; KEGG: bha:BH0790 hypothetical protein.
 
    0.951
Apre_0147
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein.
 
     0.889
Apre_0146
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein.
 
     0.883
Apre_0144
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0794 sugar transport system (permease) (binding protein dependent transporter).
 
     0.865
Apre_0145
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0795 sugar transport system (permease) (binding protein dependent transporter).
 
     0.862
Apre_0148
PFAM: Hyaluronidase; KEGG: xcv:XCV4043 putative secreted protein.
 
  
 0.840
Apre_1609
TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0120 putative alpha-1,2-mannosidase.
 
     0.759
Apre_1608
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_4901 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.606
Apre_0141
KEGG: bcy:Bcer98_1171 mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I.
 
   
 0.477
Apre_0383
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bcy:Bcer98_2394 PTS system, fructose subfamily, IIC subunit.
  
  
 0.452
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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