STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0167Hypothetical protein. (543 aa)    
Predicted Functional Partners:
Apre_0168
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0290 ABC transporter ATP-binding protein.
 
     0.945
Apre_0187
PFAM: peptidase S41; KEGG: similar to Interphotoreceptor retinoid- binding protein precursor (IRBP) (Interstitial retinol-binding protein).
 
     0.772
Apre_0897
KEGG: hypothetical protein.
  
     0.766
Apre_0015
PFAM: extracellular solute-binding protein family 5; KEGG: bcr:BCAH187_A0266 extracellular solute- binding protein family 5.
  
     0.761
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.761
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
  
     0.760
Apre_0014
PFAM: extracellular solute-binding protein family 5; KEGG: bcr:BCAH187_A0266 extracellular solute- binding protein family 5.
  
     0.759
Apre_0013
PFAM: peptidoglycan hydrolase; KEGG: hypothetical protein.
  
     0.756
Apre_0091
Hypothetical protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease.
  
     0.753
Apre_0524
PFAM: metallophosphoesterase.
  
     0.746
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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