STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0187PFAM: peptidase S41; KEGG: similar to Interphotoreceptor retinoid- binding protein precursor (IRBP) (Interstitial retinol-binding protein). (466 aa)    
Predicted Functional Partners:
Apre_0183
PFAM: peptidase M22 glycoprotease; KEGG: bha:BH0546 glycoprotein endopeptidase.
  
   0.829
Apre_0184
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
    0.788
Apre_0182
PFAM: protein of unknown function UPF0079; KEGG: protein of unknown function UPF0079; K06925.
       0.782
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.782
Apre_0186
Hypothetical protein.
       0.782
Apre_0167
Hypothetical protein.
 
     0.772
Apre_0897
KEGG: hypothetical protein.
  
     0.757
Apre_0091
Hypothetical protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease.
  
     0.750
Apre_0524
PFAM: metallophosphoesterase.
 
    0.749
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.743
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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