STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_0196KEGG: rlt:Rleg2_1581 hypothetical protein. (378 aa)    
Predicted Functional Partners:
Apre_0195
PFAM: toxic anion resistance family protein; KEGG: bsu:BSU00260 hypothetical protein; Belongs to the TelA family.
 
  
 0.983
Apre_0194
KEGG: bsu:BSU15840 hypothetical protein.
       0.774
Apre_0091
Hypothetical protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease.
  
     0.726
Apre_0013
PFAM: peptidoglycan hydrolase; KEGG: hypothetical protein.
  
     0.648
Apre_0033
KEGG: U-box domain-containing protein.
  
     0.600
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.594
Apre_1367
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: smd:Smed_3061 transcriptional regulator, MarR family.
  
     0.578
Apre_1138
Hypothetical protein.
  
     0.576
Apre_0499
PFAM: YodA domain protein; KEGG: baa:BXA0197 zinc-binding lipoprotein AdcA domain protein, (pXO1-130).
  
     0.563
Apre_0991
KEGG: hypothetical protein.
  
     0.554
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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